Index A | C | D | E | F | G | I | L | M | N | O | P | R | S | T | V A add_ancestor() (tsinfer.AncestorData method) add_ancestral_state_array() (in module tsinfer) add_provenance() (tsinfer.AncestorData method) ancestor() (tsinfer.AncestorData method) AncestorData (class in tsinfer) ancestors() (tsinfer.AncestorData method) ancestors_length (tsinfer.AncestorData property) arrays() (tsinfer.AncestorData method) augment_ancestors() (in module tsinfer) C clear_provenances() (tsinfer.AncestorData method) close() (tsinfer.AncestorData method) copy() (tsinfer.AncestorData method) D data_equal() (tsinfer.AncestorData method) E EIGHT_BIT (tsinfer.GenotypeEncoding attribute) F file_size (tsinfer.AncestorData property) FileFormatError finalise() (tsinfer.AncestorData method) G generate_ancestors() (in module tsinfer) GenotypeEncoding (class in tsinfer) I infer() (in module tsinfer) info (tsinfer.AncestorData property) insert_proxy_samples() (tsinfer.AncestorData method) L load() (in module tsinfer) M match_ancestors() (in module tsinfer) match_ancestors_batch_finalise() (in module tsinfer) match_ancestors_batch_group_finalise() (in module tsinfer) match_ancestors_batch_group_partition() (in module tsinfer) match_ancestors_batch_groups() (in module tsinfer) match_ancestors_batch_init() (in module tsinfer) match_samples() (in module tsinfer) match_samples_batch_finalise() (in module tsinfer) match_samples_batch_init() (in module tsinfer) match_samples_batch_partition() (in module tsinfer) N num_sites (tsinfer.AncestorData property) O ONE_BIT (tsinfer.GenotypeEncoding attribute) P post_process() (in module tsinfer) provenances() (tsinfer.AncestorData method) R record_provenance() (tsinfer.AncestorData method) S sequence_length (tsinfer.AncestorData property) Site (class in tsinfer) sites_position (tsinfer.AncestorData property) T truncate_ancestors() (tsinfer.AncestorData method) V Variant (class in tsinfer) VariantData (class in tsinfer)
