Index A | C | D | F | G | H | I | L | M | N | P | R | S | T | V A add_ancestor() (tsinfer.AncestorData method) add_individual() (tsinfer.SampleData method) add_population() (tsinfer.SampleData method) add_provenance() (tsinfer.AncestorData method) (tsinfer.SampleData method) add_site() (tsinfer.SampleData method) ancestor() (tsinfer.AncestorData method) AncestorData (class in tsinfer) ancestors() (tsinfer.AncestorData method) ancestors_length (tsinfer.AncestorData property) arrays() (tsinfer.AncestorData method) (tsinfer.SampleData method) assert_data_equal() (tsinfer.SampleData method) augment_ancestors() (in module tsinfer) C clear_provenances() (tsinfer.AncestorData method) (tsinfer.SampleData method) close() (tsinfer.AncestorData method) (tsinfer.SampleData method) copy() (tsinfer.AncestorData method) (tsinfer.SampleData method) D data_equal() (tsinfer.AncestorData method) (tsinfer.SampleData method) F file_size (tsinfer.AncestorData property) (tsinfer.SampleData property) FileFormatError finalise() (tsinfer.AncestorData method) (tsinfer.SampleData method) from_tree_sequence() (tsinfer.SampleData class method) G generate_ancestors() (in module tsinfer) H haplotypes() (tsinfer.SampleData method) I infer() (in module tsinfer) info (tsinfer.AncestorData property) (tsinfer.SampleData property) insert_proxy_samples() (tsinfer.AncestorData method) L load() (in module tsinfer) M match_ancestors() (in module tsinfer) match_samples() (in module tsinfer) merge() (tsinfer.SampleData method) min_site_times() (tsinfer.SampleData method) N num_alleles() (tsinfer.SampleData method) num_sites (tsinfer.AncestorData property) P post_process() (in module tsinfer) provenances() (tsinfer.AncestorData method) (tsinfer.SampleData method) R record_provenance() (tsinfer.AncestorData method) (tsinfer.SampleData method) S SampleData (class in tsinfer) sequence_length (tsinfer.AncestorData property) set_inference_sites() (tsinfer.AncestorData method) Site (class in tsinfer) sites() (tsinfer.SampleData method) sites_alleles (tsinfer.SampleData property) sites_ancestral_allele (tsinfer.SampleData property) sites_genotypes (tsinfer.SampleData property) sites_position (tsinfer.AncestorData property) subset() (tsinfer.SampleData method) T truncate_ancestors() (tsinfer.AncestorData method) V Variant (class in tsinfer) variants() (tsinfer.SampleData method)
